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Protein Alignment LSm3 and AT3G62840
DIOPT Version :10
| Sequence 1: | NP_732931.1 |
Gene: | LSm3 / 42842 |
FlyBaseID: | FBgn0051184 |
Length: | 103 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_567134.3 |
Gene: | AT3G62840 / 825459 |
AraportID: | AT3G62840 |
Length: | 109 |
Species: | Arabidopsis thaliana |
| Alignment Length: | 92 |
Identity: | 34/92 - (36%) |
| Similarity: | 48/92 - (52%) |
Gaps: | 23/92 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 18 PLDLIRLSL--DEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAK 80
||.::.:|: :.:|.:..||.|:|.||:.|||:|.||||.:..|..| ||.||.|
plant 23 PLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWT----------EVPKTGK 77
Fly 81 -----------RTIPMLFVRGDGVILV 96
|.|..:|:|||.||:|
plant 78 GKKKALPVNRDRFISKMFLRGDSVIIV 104
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| LSm3 | NP_732931.1 |
LSm3 |
17..98 |
CDD:212477 |
34/92 (37%) |
| AT3G62840 | NP_567134.3 |
Sm_D2 |
19..108 |
CDD:212467 |
34/92 (37%) |
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