Protein Alignment LSm3 and Lsm3

DIOPT Version :9

• Sequence 1: NP_001163707.1
• Gene: LSm3 / 42842
• FlyBaseID: FBgn0051184
• Length: 103
• Species: Drosophila melanogaster
• Sequence 2: NP_080585.1
• Gene: Lsm3 / 67678
• MGIID: 1914928
• Length: 102
• Species: Mus musculus
• Alignment Length: 103
• Identity: 79/103 - (76%)
• Similarity: 93/103 - (90%)
• Gaps: 1/103 - (0%)

  Fly     1 MADETEQLSQVILPVKEPLDLIRLSLDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTV 65
            |||:.:| .|....|:||||||||||||::||||||:|||||||||:||||||:|||.||||||:
Mouse     1 MADDVDQ-QQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTI 64

  Fly    66 EIDEETYEEVYKTAKRTIPMLFVRGDGVILVSPPMRVG 103
            |||||||||:||:.||.|||||||||||:||:||:|||
Mouse    65 EIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG 102

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LSm3	NP_001163707.1	LSm3	17..98	CDD:212477	68/80 (85%)
Lsm3	NP_080585.1	LSm3	16..97	CDD:212477	68/80 (85%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167845817
Domainoid	1	1.000	138	1.000	Domainoid score	I4843
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H6548
Inparanoid	1	1.050	167	1.000	Inparanoid score	I4164
Isobase	1	0.950	-	0	Normalized mean entropy	S375
OMA	1	1.010	-	-		QHG54341
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0004431
OrthoInspector	1	1.000	-	-		oto94573
orthoMCL	1	0.900	-	-		OOG6_101597
Panther	1	1.100	-	-	O	PTHR13110
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R667
SonicParanoid	1	1.000	-	-		X3139
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	14	13.880