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Protein Alignment LSm3 and Lsm3
DIOPT Version :10
| Sequence 1: | NP_732931.1 |
Gene: | LSm3 / 42842 |
FlyBaseID: | FBgn0051184 |
Length: | 103 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001100081.1 |
Gene: | Lsm3 / 297455 |
RGDID: | 1305971 |
Length: | 102 |
Species: | Rattus norvegicus |
| Alignment Length: | 103 |
Identity: | 79/103 - (76%) |
| Similarity: | 93/103 - (90%) |
Gaps: | 1/103 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MADETEQLSQVILPVKEPLDLIRLSLDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTV 65
|||:.:| .|....|:||||||||||||::||||||:|||||||||:||||||:|||.||||||:
Rat 1 MADDVDQ-QQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTI 64
Fly 66 EIDEETYEEVYKTAKRTIPMLFVRGDGVILVSPPMRVG 103
|||||||||:||:.||.|||||||||||:||:||:|||
Rat 65 EIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG 102
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| LSm3 | NP_732931.1 |
LSm3 |
17..98 |
CDD:212477 |
68/80 (85%) |
| Lsm3 | NP_001100081.1 |
LSm3 |
16..97 |
CDD:212477 |
68/80 (85%) |
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