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Protein Alignment LSm3 and lsm-3
DIOPT Version :10
| Sequence 1: | NP_732931.1 |
Gene: | LSm3 / 42842 |
FlyBaseID: | FBgn0051184 |
Length: | 103 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_502579.1 |
Gene: | lsm-3 / 178303 |
WormBaseID: | WBGene00003077 |
Length: | 102 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 101 |
Identity: | 70/101 - (69%) |
| Similarity: | 87/101 - (86%) |
Gaps: | 1/101 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MADETEQLSQVILPVKEPLDLIRLSLDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTV 65
||.|.:::: :...|:|||||:||||||:|||||||:|||||||.||||||||||.:.|||:||.
Worm 1 MATEKKEVT-LSATVEEPLDLLRLSLDERVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETITTR 64
Fly 66 EIDEETYEEVYKTAKRTIPMLFVRGDGVILVSPPMR 101
|:||:|:||:||..||.:||||||||.|||||||:|
Worm 65 EVDEDTFEEIYKQTKRVVPMLFVRGDSVILVSPPIR 100
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| LSm3 | NP_732931.1 |
LSm3 |
17..98 |
CDD:212477 |
62/80 (78%) |
| lsm-3 | NP_502579.1 |
LSm3 |
16..97 |
CDD:212477 |
62/80 (78%) |
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