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Protein Alignment LSm3 and SmD2
DIOPT Version :10
| Sequence 1: | NP_732931.1 |
Gene: | LSm3 / 42842 |
FlyBaseID: | FBgn0051184 |
Length: | 103 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_318388.2 |
Gene: | SmD2 / 1278762 |
VectorBaseID: | AGAMI1_006158 |
Length: | 119 |
Species: | Anopheles gambiae |
| Alignment Length: | 82 |
Identity: | 31/82 - (37%) |
| Similarity: | 49/82 - (59%) |
Gaps: | 3/82 - (3%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 18 PLDLIRLSL--DEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAK 80
||.::..|: :.:|.:..||.::|.||:.|||:|.||||.:.:|..|.:....:..::|....|
Mosquito 27 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEIPRTGKGKKKVKPVNK 91
Fly 81 -RTIPMLFVRGDGVILV 96
|.|..:|:|||.||||
Mosquito 92 DRFISKMFLRGDSVILV 108
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| LSm3 | NP_732931.1 |
LSm3 |
17..98 |
CDD:212477 |
31/82 (38%) |
| SmD2 | XP_318388.2 |
Sm_D2 |
23..112 |
CDD:212467 |
31/82 (38%) |
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