DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and Rab14

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_446041.2 Gene:Rab14 / 94197 RGDID:620881 Length:215 Species:Rattus norvegicus


Alignment Length:214 Identity:74/214 - (34%)
Similarity:117/214 - (54%) Gaps:23/214 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72
            :.|.||:||..|||:.|::|:..|:|......|||.:|.|:.:.|:.:.:.:|||||||||||::
  Rat    11 IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRA 75

  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLD-NRQVST 136
            :..::||||...::|||:|..:::.:|.||    |..|......:...:::|||.||: .|.|:.
  Rat    76 VTRSYYRGAAGALMVYDITRRSTYNHLSSW----LTDARNLTNPNTVIILIGNKADLEAQRDVTY 136

  Fly   137 RRAQQWCQSKNDIPYYETSAKEGINVEMAF--------QVIAKNALELEAEAEVINDFPD----- 188
            ..|:|:.: :|.:.:.|.|||.|.|||.||        |.|...:|:|.|....:...|.     
  Rat   137 EEAKQFAE-ENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGG 200

  Fly   189 QITLGSQNNRPGNPDNCQC 207
            ::|...|..|.|    |.|
  Rat   201 RLTSEPQPQREG----CGC 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 66/178 (37%)
RAB 9..174 CDD:197555 64/173 (37%)
Rab14NP_446041.2 Rab14 10..175 CDD:133322 62/168 (37%)
Effector region. /evidence=ECO:0000250 40..48 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..215 6/30 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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