DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and RASL10B

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_016880789.1 Gene:RASL10B / 91608 HGNCID:30295 Length:211 Species:Homo sapiens


Alignment Length:150 Identity:39/150 - (26%)
Similarity:65/150 - (43%) Gaps:21/150 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAG 66
            :|...|..:|.:||...|||::::.|::...||.....|.........||:|..|..:||.|   
Human    57 AGGMVSTYRVAVLGARGVGKSAIVRQFLYNEFSEVCVPTTARRLYLPAVVMNGHVHDLQILD--- 118

  Fly    67 QERFQSLGV----AFYRGAD-CC---------VLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDH 117
               |..:..    .....|| ||         :||||:...:||:.:.:.|.: :::........
Human   119 ---FPPISAFPVNTLQEWADTCCRGLRSVHAYILVYDICCFDSFEYVKTIRQQ-ILETRVIGTSE 179

  Fly   118 FPFVVLGNKVDLDNRQVSTR 137
            .|.:::|||.||...:|..|
Human   180 TPIIIVGNKRDLQRGRVIPR 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 36/142 (25%)
RAB 9..174 CDD:197555 36/142 (25%)
RASL10BXP_016880789.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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