DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and YPT10

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_009823.2 Gene:YPT10 / 852567 SGDID:S000000468 Length:199 Species:Saccharomyces cerevisiae


Alignment Length:206 Identity:68/206 - (33%)
Similarity:108/206 - (52%) Gaps:33/206 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTK--EVVVND----RVVTMQIWDT 64
            ::.:||::||||||||||::.:..:.:|..::.|||||.|.||  ||..||    :.:.|:||||
Yeast     2 EATIKVVLLGDSSVGKTSIVTRLKSGKFLAKHAATIGAAFITKTIEVPSNDSSTEKRIHMEIWDT 66

  Fly    65 AGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDL 129
            |||||::||...:||.|:..::|:::...:|.:...:|..:...:|....     .:::|||.||
Yeast    67 AGQERYKSLVPMYYRDANIALIVFELGDVSSLQCAKTWFQDLQDRAQGTQ-----VIIVGNKYDL 126

  Fly   130 ----DNRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVINDFPDQI 190
                .:.:|:.....|      .:||...|||.|.|    |..:.|..:.|..|:        |.
Yeast   127 VCEEHSGEVTIPAELQ------GLPYVAVSAKTGYN----FDTLNKIIISLVPES--------QF 173

  Fly   191 TLGSQNNRPGN 201
            ...|:||..||
Yeast   174 KTLSKNNEQGN 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 61/179 (34%)
RAB 9..174 CDD:197555 60/174 (34%)
YPT10NP_009823.2 Rab 5..158 CDD:206640 58/167 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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