Protein Alignment Rab7 and YPT1

DIOPT Version :9

• Sequence 1: NP_001247276.1
• Gene: Rab7 / 42841
• FlyBaseID: FBgn0015795
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_116615.1
• Gene: YPT1 / 850505
• SGDID: S000001856
• Length: 206
• Species: Saccharomyces cerevisiae
• Alignment Length: 181
• Identity: 65/181 - (35%)
• Similarity: 105/181 - (58%)
• Gaps: 16/181 - (8%)

  Fly     1 MSGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTA 65
            |:.....|.|::::|:|.|||:.|:.::.:..::|.|.:|||.||..|.|.::.:.|.:||||||
Yeast     1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTA 65

  Fly    66 GQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPF-----VVLGN 125
            |||||:::..::|||:...::|||||...||..:..|..|.         |.:..     :::||
Yeast    66 GQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEI---------DRYATSTVLKLLVGN 121

  Fly   126 KVDL-DNRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALE 175
            |.|| |.|.|....|:::..: |.:|:.||||.:..|||.||..:|:...|
Yeast   122 KCDLKDKRVVEYDVAKEFADA-NKMPFLETSALDSTNVEDAFLTMARQIKE 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab7	NP_001247276.1	Rab7	9..179	CDD:206655	63/173 (36%)
		RAB	9..174	CDD:197555	62/170 (36%)
YPT1	NP_116615.1	Rab1_Ypt1	7..172	CDD:206661	64/175 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910