Protein Alignment Rab7 and Rab27b

DIOPT Version :9

• Sequence 1: NP_001247276.1
• Gene: Rab7 / 42841
• FlyBaseID: FBgn0015795
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_445911.1
• Gene: Rab27b / 84590
• RGDID: 620114
• Length: 218
• Species: Rattus norvegicus
• Alignment Length: 214
• Identity: 75/214 - (35%)
• Similarity: 119/214 - (55%)
• Gaps: 18/214 - (8%)

  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDR----------VVTMQIW 62
            |:|::.||||.||||:.:.:|.:.:|:.::..|:|.||..|.||.:.:          .|.:|:|
  Rat     9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGSSGKAFKVHLQLW 73

  Fly    63 DTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKV 127
            ||||||||:||..||:|.|...:|::|:|:..||.|:.:|..:....|...:||   .|::|||.
  Rat    74 DTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD---IVLIGNKA 135

  Fly   128 D-LDNRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQV---IAKNALELEAEAEVINDFPD 188
            | ||.|:|:.|:|::..: |..|||:||||..|.|||.:.:.   :....:|...|...:.|..:
  Rat   136 DLLDQREVNERQARELAE-KYGIPYFETSAATGQNVEKSVETLLDLIMKRMEKCVEKTQVPDTVN 199

  Fly   189 QITLGSQNNRPGNPDNCQC 207
            .:..|..:........|.|
  Rat   200 GVNSGKVDGEKPAEKKCAC 218

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab7	NP_001247276.1	Rab7	9..179	CDD:206655	69/183 (38%)
		RAB	9..174	CDD:197555	68/178 (38%)
Rab27b	NP_445911.1	Rab27A	6..185	CDD:206700	69/179 (39%)
		Effector region. /evidence=ECO:0000250	38..46		2/7 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910