DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab7 and RABA5E

DIOPT Version :10

Sequence 1:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_563750.3 Gene:RABA5E / 837091 AraportID:AT1G05810 Length:264 Species:Arabidopsis thaliana


Alignment Length:192 Identity:67/192 - (34%)
Similarity:119/192 - (61%) Gaps:7/192 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQ 67
            ||::.|.|::::|||:|||::|:::|....||...|||||.:|.|:.:.:..:.|..||||||||
plant    53 GREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQ 117

  Fly    68 ERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDN- 131
            |||:::..|:||||...::|||:|...:|:::..|.||..|.:...    ...:::|||.||:| 
plant   118 ERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTT----VARMLVGNKCDLENI 178

  Fly   132 RQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVIND-FPDQITL 192
            |.||....:...:.:. :.:.||||.:..||:.||:::..:.....:..::.:| :.|::|:
plant   179 RAVSVEEGKALAEEEG-LFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTV 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_524472.1 Rab7 9..179 CDD:206655 61/170 (36%)
RABA5ENP_563750.3 Rab11_like 56..220 CDD:206660 62/168 (37%)

Return to query results.
Submit another query.