DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and ARA4

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_181842.1 Gene:ARA4 / 818915 AraportID:AT2G43130 Length:214 Species:Arabidopsis thaliana


Alignment Length:187 Identity:64/187 - (34%)
Similarity:117/187 - (62%) Gaps:7/187 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72
            |.|::|:|||:|||::|:.:|....|:...|||||.:|.|:.::::.:.|..|||||||||||::
plant    12 LFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRA 76

  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDN-RQVST 136
            :..|:||||...::|||:|..::|:|:..|.||.    :.........:::|||.||:: |.||.
plant    77 VTSAYYRGAVGALVVYDITRSSTFENVGRWLDEL----NTHSDTTVAKMLIGNKCDLESIRAVSV 137

  Fly   137 RRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVIND-FPDQITL 192
            ...:...:|:. :.:.||||.:..||:.||:::.:......:..::.:| :.:::|:
plant   138 EEGKSLAESEG-LFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKEELTV 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 61/170 (36%)
RAB 9..174 CDD:197555 61/165 (37%)
ARA4NP_181842.1 Rab11_like 10..174 CDD:206660 62/166 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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