DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and rab9a

DIOPT Version :10

Sequence 1:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001072637.1 Gene:rab9a / 780093 XenbaseID:XB-GENE-487794 Length:201 Species:Xenopus tropicalis


Alignment Length:204 Identity:100/204 - (49%)
Similarity:134/204 - (65%) Gaps:7/204 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQER 69
            |.||||:|:|||..|||:||||:||..:|..|...|||.:|..||:.|:..:|||||||||||||
 Frog     4 KSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHLVTMQIWDTAGQER 68

  Fly    70 FQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNRQV 134
            |:||...||||:|||:|.:.|....||:||.:|:.||:..|..:|||.||||:||||:|:.:|||
 Frog    69 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLTNWKKEFIYYADVKDPDSFPFVILGNKIDITDRQV 133

  Fly   135 STRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEA-EVINDFPDQITLGSQNNR 198
            |...||.||:...:.||:|||||:..||..||:...:..|.:|..: ::||  .|.:.|    :|
 Frog   134 SVEEAQAWCRDNGNNPYFETSAKDATNVAAAFEEAVRRVLAIEDRSDQLIN--TDTVNL----HR 192

  Fly   199 PGNPDNCQC 207
            ...|....|
 Frog   193 KPKPTTACC 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_524472.1 Rab7 9..179 CDD:206655 90/169 (53%)
rab9aNP_001072637.1 Rab9 4..172 CDD:206697 91/167 (54%)

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