DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and rab9a

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001072637.1 Gene:rab9a / 780093 XenbaseID:XB-GENE-487794 Length:201 Species:Xenopus tropicalis


Alignment Length:204 Identity:100/204 - (49%)
Similarity:134/204 - (65%) Gaps:7/204 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQER 69
            |.||||:|:|||..|||:||||:||..:|..|...|||.:|..||:.|:..:|||||||||||||
 Frog     4 KSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHLVTMQIWDTAGQER 68

  Fly    70 FQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNRQV 134
            |:||...||||:|||:|.:.|....||:||.:|:.||:..|..:|||.||||:||||:|:.:|||
 Frog    69 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLTNWKKEFIYYADVKDPDSFPFVILGNKIDITDRQV 133

  Fly   135 STRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEA-EVINDFPDQITLGSQNNR 198
            |...||.||:...:.||:|||||:..||..||:...:..|.:|..: ::||  .|.:.|    :|
 Frog   134 SVEEAQAWCRDNGNNPYFETSAKDATNVAAAFEEAVRRVLAIEDRSDQLIN--TDTVNL----HR 192

  Fly   199 PGNPDNCQC 207
            ...|....|
 Frog   193 KPKPTTACC 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 90/169 (53%)
RAB 9..174 CDD:197555 88/164 (54%)
rab9aNP_001072637.1 Rab9 4..172 CDD:206697 91/167 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1172019at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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