DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and RIT2

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_002921.1 Gene:RIT2 / 6014 HGNCID:10017 Length:217 Species:Homo sapiens


Alignment Length:170 Identity:51/170 - (30%)
Similarity:89/170 - (52%) Gaps:6/170 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQSLG 74
            ||::||...|||:::..|:::.:|.:.:..|| .|....:|.:::....:.|.|||||..|.::.
Human    22 KVVMLGAGGVGKSAMTMQFISHQFPDYHDPTI-EDAYKTQVRIDNEPAYLDILDTAGQAEFTAMR 85

  Fly    75 VAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDN-RQVSTRR 138
            ..:.||.:..::.|.||...||:....:: |.:.|.  |.....|.|::|||:||:. |||||..
Human    86 EQYMRGGEGFIICYSVTDRQSFQEAAKFK-ELIFQV--RHTYEIPLVLVGNKIDLEQFRQVSTEE 147

  Fly   139 AQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEA 178
            .....|..| ..::||||.....::.||..:.:...:.|:
Human   148 GLSLAQEYN-CGFFETSAALRFCIDDAFHGLVREIRKKES 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 51/170 (30%)
RAB 9..174 CDD:197555 50/164 (30%)
RIT2NP_002921.1 Rit_Rin_Ric 19..190 CDD:206712 51/170 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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