DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and zgc:162171

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001076317.1 Gene:zgc:162171 / 565931 ZFINID:ZDB-GENE-070424-24 Length:224 Species:Danio rerio


Alignment Length:192 Identity:61/192 - (31%)
Similarity:113/192 - (58%) Gaps:3/192 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDR-VVTMQIWDTAGQ 67
            :::.||||:::||..|||||::.:||::.||..|:||||.||..|.:..:.| ||.:|:||.|||
Zfish     2 QQERLLKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLNWDHRTVVRLQLWDIAGQ 66

  Fly    68 ERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNR 132
            ||:.::...:||.|...::|:|:|..::|:.:..|:.:...:.:..:....|.|:|.||.|....
Zfish    67 ERYGNMTRVYYREAVGALVVFDMTRASTFQAVLKWKKDLDSKVALGNGRPLPAVLLANKCDQQRY 131

  Fly   133 QVSTR--RAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVINDFPDQITL 192
            .:.::  :.:.:.:....:.:||||||:..|::.|...:.:|.:.:|.|...:...|..:.|
Zfish   132 GLCSKLPKLEHFSRDHGFVGWYETSAKDNTNIDAAIMRLVENIMAVEEENVPVESDPSVLIL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 57/172 (33%)
RAB 9..174 CDD:197555 56/167 (34%)
zgc:162171NP_001076317.1 Rab32_Rab38 7..187 CDD:206692 58/179 (32%)
RAB 7..176 CDD:197555 56/168 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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