DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and ift22

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001011271.1 Gene:ift22 / 496722 XenbaseID:XB-GENE-977482 Length:184 Species:Xenopus tropicalis


Alignment Length:111 Identity:24/111 - (21%)
Similarity:48/111 - (43%) Gaps:22/111 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVV-------------TMQI 61
            ||:::|.:..|||.|.|      |.:....|||.::...:.|   |::             .:::
 Frog     5 KVLVVGPTESGKTILAN------FISDATETIGGEYNPTQGV---RILEFECPNGNKGSSCEVEL 60

  Fly    62 WDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFL 107
            ||..|..:|:|......:.:...::|:....|:..|.::.|...|:
 Frog    61 WDCGGDSKFESCWPVIMKDSHGVIIVFSADIPSHLKEIEMWHLNFI 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 24/111 (22%)
RAB 9..174 CDD:197555 24/111 (22%)
ift22NP_001011271.1 P-loop_NTPase 5..123 CDD:393306 24/111 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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