Protein Alignment Rab7 and rab1a

DIOPT Version :9

• Sequence 1: NP_001247276.1
• Gene: Rab7 / 42841
• FlyBaseID: FBgn0015795
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_001004787.1
• Gene: rab1a / 448007
• XenbaseID: XB-GENE-485527
• Length: 204
• Species: Xenopus tropicalis
• Alignment Length: 189
• Identity: 68/189 - (35%)
• Similarity: 108/189 - (57%)
• Gaps: 15/189 - (7%)

  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72
            |.|::::|||.|||:.|:.::.:..::..|.:|||.||..:.:.::.:.:.:|||||||||||::
 Frog    11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRT 75

  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNRQ-VST 136
            :..::||||...::|||||...||.|:..|..|....||    ::...:::|||.||..:: |..
 Frog    76 ITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGNKCDLTTKKVVDY 136

  Fly   137 RRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVINDFPDQITLGSQ 195
            ..|:::..|.. ||:.|||||...|||.||..:|         ||:........|.|.|
 Frog   137 TTAKEFADSLG-IPFLETSAKNATNVEQAFMTMA---------AEIKKRMGPGATAGGQ 185

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab7	NP_001247276.1	Rab7	9..179	CDD:206655	62/170 (36%)
		RAB	9..174	CDD:197555	62/165 (38%)
rab1a	NP_001004787.1	Rab1_Ypt1	10..175	CDD:206661	65/177 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910