Protein Alignment Rab7 and rnd3b

DIOPT Version :9

• Sequence 1: NP_001247276.1
• Gene: Rab7 / 42841
• FlyBaseID: FBgn0015795
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_001002591.1
• Gene: rnd3b / 436864
• ZFINID: ZDB-GENE-040718-331
• Length: 223
• Species: Danio rerio
• Alignment Length: 196
• Identity: 52/196 - (26%)
• Similarity: 94/196 - (47%)
• Gaps: 27/196 - (13%)

  Fly    10 KVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQSLG 74
            |::::||:..|||||:|.:....|...|..|:..:: |....|:...|.:.:|||:|...:.::.
Zfish    10 KIVVVGDTQCGKTSLLNVFAKDSFPENYVPTVFENY-TASFEVDTLRVELSLWDTSGSPYYDNVR 73

  Fly    75 VAFYRGADCCVLVYDVTAPNSFKN-LDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNRQVSTRR 138
            ...|..||..::.:|:..|.:.:| |..|:.| :.:..|    :...:::|.|.||        |
Zfish    74 PLSYPDADAVLICFDIGRPETLENVLRKWKGE-IEEFCP----NTKILLVGCKSDL--------R 125

  Fly   139 AQ--QWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAE--AEVINDFPDQITLG--SQNN 197
            |.  .:.|..||||   :|..:|.|:.   ::|:...:|..|:  ...:.|.....||.  |:||
Zfish   126 ADLATFVQLSNDIP---SSYDQGSNMA---KLISAPYIECSAQQSENSVRDIFHIATLACVSKNN 184

  Fly   198 R 198
            :
Zfish   185 K 185

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab7	NP_001247276.1	Rab7	9..179	CDD:206655	45/171 (26%)
		RAB	9..174	CDD:197555	44/166 (27%)
rnd3b	NP_001002591.1	P-loop_NTPase	4..182	CDD:304359	49/191 (26%)
		RHO	11..182	CDD:197554	48/190 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910