DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and Rab1

DIOPT Version :10

Sequence 1:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster


Alignment Length:197 Identity:65/197 - (32%)
Similarity:106/197 - (53%) Gaps:26/197 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72
            |.|::::|||.|||:.|:.::.:..::..|.:|||.||..:.:.::.:.:.:|||||||||||::
  Fly    11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRT 75

  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNRQVSTR 137
            :..::||||...::|||.|...||.|:..|.:|....|.    ::...:::|||.||..::|...
  Fly    76 ITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYAC----ENVNKLLVGNKSDLTTKKVVDH 136

  Fly   138 RAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVINDFPDQITLGSQNNRPGNP 202
            .......::..||:.|||||...|||.||..:|         ||:             .||.|.|
  Fly   137 TTAAEYAAQLGIPFLETSAKSATNVEQAFMTMA---------AEI-------------KNRVGPP 179

  Fly   203 DN 204
            .:
  Fly   180 SS 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_524472.1 Rab7 9..179 CDD:206655 58/169 (34%)
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 61/189 (32%)

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