DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and CG14669

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001262281.1 Gene:CG14669 / 40652 FlyBaseID:FBgn0037326 Length:306 Species:Drosophila melanogaster


Alignment Length:189 Identity:53/189 - (28%)
Similarity:74/189 - (39%) Gaps:51/189 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LKVIILGDSSVGKTSLMNQYVNKRFSNQ---------YKATIGADFCTKEVVVNDRVVTMQIWDT 64
            ||...||.:.|||||::.|:....|...         ||..:..|.|.:|::|         .|.
  Fly    95 LKAAFLGATGVGKTSILQQFFYHDFPRTHQTTTHRKIYKNCLVCDTCIRELMV---------LDV 150

  Fly    65 AGQERFQS-----------LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHF 118
            ..|:||.:           ||:   |.....|||||:....:|:...|.||:.|...|.||   |
  Fly   151 PPQKRFPADNFAEWNNGHPLGL---RTVHAYVLVYDMGNLETFQYCRSMRDQILDSFSHRD---F 209

  Fly   119 PFVVLGNKVDLDNRQVSTRRAQQWCQSKNDIP----------YYETSAKEGINVEMAFQ 167
            ..:|:|||.|      :...||...|...||.          |.|.||:....:...|:
  Fly   210 SIIVVGNKFD------NVTEAQANSQELKDISTLVRKHWRCGYVECSAQYNYKIGDVFR 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 53/189 (28%)
RAB 9..174 CDD:197555 53/189 (28%)
CG14669NP_001262281.1 P-loop_NTPase 95..267 CDD:304359 53/189 (28%)
small_GTPase 96..265 CDD:197466 52/188 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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