DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and rhebl1

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_988937.1 Gene:rhebl1 / 394534 XenbaseID:XB-GENE-493839 Length:184 Species:Xenopus tropicalis


Alignment Length:163 Identity:48/163 - (29%)
Similarity:75/163 - (46%) Gaps:15/163 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQSLG 74
            |:::||..||||:||..|::...|...|:.|| .:..:|..|:......:.:.|||||:.:..|.
 Frog     8 KIVMLGYPSVGKSSLALQFIKGDFPKDYEPTI-ENTWSKTFVMGSDEFELDVVDTAGQDEYSLLP 71

  Fly    75 VAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDN--RQV--- 134
            .:|..|....::||.|....||:..   |....|....|.....|.|::|||.||..  |:|   
 Frog    72 QSFIFGIHGYIVVYSVACSRSFQIA---RAIHSILVDRRGKCLMPIVLVGNKNDLPTHCREVKPE 133

  Fly   135 -STRRAQQWCQSKNDIPYYETSAKEGINVEMAF 166
             ..:.|:.|     ...:.|.|||:....::.|
 Frog   134 DGKKLAESW-----GAAFLEVSAKDPERSKLIF 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 48/163 (29%)
RAB 9..174 CDD:197555 48/163 (29%)
rhebl1NP_988937.1 RheB 6..184 CDD:206709 48/163 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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