DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and Rab4

DIOPT Version :10

Sequence 1:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster


Alignment Length:219 Identity:78/219 - (35%)
Similarity:119/219 - (54%) Gaps:20/219 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTA 65
            ||.....|.|.:|:|.:..||:.|::.::..:|.:....|||.:|.::.|.|..:.|.:||||||
  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTA 65

  Fly    66 GQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLD 130
            |||||:|:..::||||...:||||.|:.:||..|.:|.::....|||    :...:::|||.||:
  Fly    66 GQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASP----NIVILLVGNKKDLE 126

  Fly   131 N-RQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVINDFPDQITLGS 194
            . |.|:...|..:.| :|::.:.|||||.|.|||.||...:|..|   |:.|.....|::|..|.
  Fly   127 EARDVTFLEASTFAQ-ENELIFLETSAKTGENVEEAFLKCSKTIL---AKIETGELDPERIGSGI 187

  Fly   195 Q-----------NNRPGNPDNCQC 207
            |           ..|..|..:|.|
  Fly   188 QYGGAALRNLQTRQRSINKPDCTC 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_524472.1 Rab7 9..179 CDD:206655 65/170 (38%)
Rab4NP_523777.1 Rab4 9..169 CDD:206696 64/164 (39%)

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