Protein Alignment Rab7 and Rabl2

DIOPT Version :9

• Sequence 1: NP_001247276.1
• Gene: Rab7 / 42841
• FlyBaseID: FBgn0015795
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: XP_006242287.1
• Gene: Rabl2 / 362987
• RGDID: 1306749
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 188
• Identity: 59/188 - (31%)
• Similarity: 100/188 - (53%)
• Gaps: 11/188 - (5%)

  Fly     9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQSL 73
            :|:|.||||:|||:.||.:::...|..|..:|...........|:.:.:.:..|||||||||||:
  Rat    49 VKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSM 113

  Fly    74 GVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNRQVSTRR 138
            ..::|..|..|::|:||....::|||.:|..| |.:..|    ..|.:::.||:|.|.:.  |::
  Rat   114 HASYYHKAHACIMVFDVQRKITYKNLGTWYAE-LREFRP----EIPCILVANKIDADIQM--TQK 171

  Fly   139 AQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVINDFPDQITLGSQN 196
            ...:.: |..:|.|..||.:|.||...|....:.|:..:..::   ||.|::....:|
  Rat   172 NFSFAK-KFSLPLYFVSAADGTNVVKLFNDAIRLAVAYKKSSQ---DFMDEVLQELEN 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab7	NP_001247276.1	Rab7	9..179	CDD:206655	55/169 (33%)
		RAB	9..174	CDD:197555	54/164 (33%)
Rabl2	XP_006242287.1	RabL2	49..209	CDD:133324	55/167 (33%)
		RAB	49..198	CDD:197555	53/156 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910