Protein Alignment Rab7 and Rabl6

DIOPT Version :9

• Sequence 1: NP_001247276.1
• Gene: Rab7 / 42841
• FlyBaseID: FBgn0015795
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_001102043.1
• Gene: Rabl6 / 362084
• RGDID: 1307615
• Length: 731
• Species: Rattus norvegicus
• Alignment Length: 230
• Identity: 45/230 - (19%)
• Similarity: 91/230 - (39%)
• Gaps: 69/230 - (30%)

  Fly     9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVV---------NDRVVTMQIWDT 64
            :|::|.||.:.|||:|.::...|:|..:|       ..|:|:.|         .|.||.:::||.
  Rat    44 MKIVIRGDRNTGKTALWHRLQGKKFVEEY-------IPTQEIQVTSIHWNYKTTDDVVKVEVWDV 101

  Fly    65 AGQERFQSLG----------------------VAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFL 107
            ..:.:.:..|                      :..|:..:..|:::|:|        ..|...::
  Rat   102 VDKGKCKKRGDCLKTENDPQEAESEMALDAEFLDVYKNCNGVVMMFDIT--------KQWTFNYV 158

  Fly   108 IQASPRDPDHFPFVVLGNKVDL-DNRQVSTRRAQQWCQSKNDIP------YYETSAKEGINV--- 162
            ::..|:.|.|.|..||||..|: ::|.:.....:.:.:..:..|      |.|:|.|....:
  Rat   159 LRELPKVPTHVPVCVLGNYRDMGEHRVILPDDVRDFIEHLDRPPGSSYFRYAESSMKNSFGLKYL 223

  Fly   163 -------------EMAFQVIAKNALELEAEAEVIN 184
                         |...:.:..|.|:::|..|.::
  Rat   224 HKFFNIPFLQLQRETLLRQLETNQLDIDATLEELS 258

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab7	NP_001247276.1	Rab7	9..179	CDD:206655	43/223 (19%)
		RAB	9..174	CDD:197555	42/218 (19%)
Rabl6	NP_001102043.1	P-loop_NTPase	44..221	CDD:304359	40/191 (21%)
		Ras	45..221	CDD:278499	40/190 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910