DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and Rab10

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster


Alignment Length:205 Identity:69/205 - (33%)
Similarity:112/205 - (54%) Gaps:17/205 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72
            |.|::::|||.||||.::.::.:..|::.:.:|||.||..|.|.:..:.:.:|||||||||||.:
  Fly     9 LFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHT 73

  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNRQVSTR 137
            :..::||||...:||||:|...||:|:..|    |........:....::||||.|:.:::|..:
  Fly    74 ITTSYYRGAMGIMLVYDITNEKSFENIVKW----LRNIDEHANEDVEKMILGNKCDMTDKRVVNK 134

  Fly   138 RAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALE-------LEAEAEVINDFPDQITLGSQ 195
            ...:....::.|.:.|||||..||:|.||..:|:..|:       .|.:..||      |...:|
  Fly   135 ERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERVI------IDRRNQ 193

  Fly   196 NNRPGNPDNC 205
            ...||....|
  Fly   194 EKAPGYSKCC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 61/176 (35%)
RAB 9..174 CDD:197555 59/164 (36%)
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 61/167 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454337
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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