DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and Rab35

DIOPT Version :10

Sequence 1:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster


Alignment Length:169 Identity:72/169 - (42%)
Similarity:103/169 - (60%) Gaps:7/169 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72
            |.|::|:|||.|||:||:.::.:..||..|..|||.||..:.|.:....|.:|||||||||||::
  Fly     8 LFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRT 72

  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNK-VDLDNRQVST 136
            :...:|||....::|||||...||.|:..|.:|  ||   .:.|....|::||| .|.|.:.|.|
  Fly    73 ITSTYYRGTHGVIVVYDVTNGESFANVRRWLEE--IQ---NNCDVVKKVLVGNKNDDPDRKVVIT 132

  Fly   137 RRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALE 175
            ..||::.: :.||..:|||||:.||||..|..|.:..|:
  Fly   133 EDAQRFAK-QMDIELFETSAKDNINVENMFLSITRQVLD 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_524472.1 Rab7 9..179 CDD:206655 71/168 (42%)
Rab35NP_608373.1 Rab35 3..201 CDD:133310 72/169 (43%)

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