DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and RAB37

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001157461.1 Gene:RAB37 / 326624 HGNCID:30268 Length:228 Species:Homo sapiens


Alignment Length:193 Identity:79/193 - (40%)
Similarity:114/193 - (59%) Gaps:11/193 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVIILGDSSVGKTSLMNQYVNKRF-SNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQSL 73
            ||::|||:.||||..:.|:.:..| |..:.||:|.||..|.|.|:...|.:|||||||||||:|:
Human    36 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSV 100

  Fly    74 GVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNRQVSTRR 138
            ..|:||.|...:|:||:|..:||.|:.:|..| :.:.:.||   ...::||||.|:.:.:|....
Human   101 THAYYRDAQALLLLYDITNKSSFDNIRAWLTE-IHEYAQRD---VVIMLLGNKADMSSERVIRSE 161

  Fly   139 AQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVINDFPD-QIT--LGSQNNR 198
            ..:....:..:|:.|||||.|:|||:||..|||   ||:..|....|.|. ||.  :.||..|
Human   162 DGETLAREYGVPFLETSAKTGMNVELAFLAIAK---ELKYRAGHQADEPSFQIRDYVESQKKR 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 71/169 (42%)
RAB 9..174 CDD:197555 69/164 (42%)
RAB37NP_001157461.1 Rab26 36..225 CDD:206695 79/193 (41%)
RAB 36..197 CDD:197555 70/167 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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