DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and rab18a

DIOPT Version :10

Sequence 1:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_996661.1 Gene:rab18a / 325255 ZFINID:ZDB-GENE-030131-3980 Length:205 Species:Danio rerio


Alignment Length:167 Identity:60/167 - (35%)
Similarity:101/167 - (60%) Gaps:4/167 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQSL 73
            ||::|:|:|.|||:||:.::.:..|..:..||||.||..|.:.|:.....:.||||||||||::|
Zfish     9 LKILIIGESGVGKSSLLLRFTDDTFDAEIGATIGVDFKVKTLAVDGNRAKLAIWDTAGQERFRTL 73

  Fly    74 GVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNRQVSTRR 138
            ..::||||...:|||||:...:|..||:|..|.....:..|   ...:::|||:|.|:|::....
Zfish    74 TPSYYRGAQGVILVYDVSRRETFAKLDNWLSELETYCTRND---LVKMLVGNKIDKDDREIEREE 135

  Fly   139 AQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALE 175
            ..::.: |:.:.:.|:|||....|:.||:.:.:..|:
Zfish   136 GLKFAR-KHSMLFIESSAKTRDGVQCAFEELVEKILQ 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_524472.1 Rab7 9..179 CDD:206655 60/167 (36%)
rab18aNP_996661.1 Rab18 9..169 CDD:206656 59/163 (36%)

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