DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and Rab9E

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_727438.1 Gene:Rab9E / 318148 FlyBaseID:FBgn0052673 Length:197 Species:Drosophila melanogaster


Alignment Length:164 Identity:60/164 - (36%)
Similarity:90/164 - (54%) Gaps:8/164 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGAD--FCTKEVVVNDRVVTMQIWDTAGQERFQS 72
            |:||||||.||||.|:.::.:.:|:.::::|:|.|  .|:.|.........:|:|||:..|||:.
  Fly     9 KIIILGDSGVGKTCLLMRFSDNQFTTRHRSTLGMDRRECSVEFADWRMGRMLQVWDTSDDERFKL 73

  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDN-RQVST 136
            |.....|.|...:||||:|:..||:|:|.|..|.....    ||....:::|||.|..| ||||.
  Fly    74 LKATHCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLC----PDKVIVLLVGNKSDDPNHRQVSM 134

  Fly   137 RRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIA 170
            .:...:.. :..|.:.|.|||.|.||...|..:|
  Fly   135 AQGFNYAH-RQSICFEEVSAKSGRNVYDIFSSLA 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 60/164 (37%)
RAB 9..174 CDD:197555 60/164 (37%)
Rab9ENP_727438.1 RAB 8..171 CDD:197555 60/164 (37%)
Rab 8..167 CDD:206640 59/162 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454332
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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