DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and Rala

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster


Alignment Length:165 Identity:58/165 - (35%)
Similarity:92/165 - (55%) Gaps:14/165 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQ 71
            :|.|||::|...|||::|..|::...|...|:.| .||...|:||::...|.:.|.||||||.:.
  Fly    10 ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYA 73

  Fly    72 SLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDL-DNRQVS 135
            ::...::|..:..:.|:.:|...||:....:|::.|   ..::.:..||:::|||.|| |.|:|.
  Fly    74 AIRDNYFRSGEGFLCVFSITDDESFQATQEFREQIL---RVKNDESIPFLLVGNKCDLNDKRKVP 135

  Fly   136 TR----RAQQWCQSKNDIPYYETSAKEGINVEMAF 166
            ..    |||||.     :||.|||||...||:..|
  Fly   136 LSECQLRAQQWA-----VPYVETSAKTRENVDKVF 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 57/163 (35%)
RAB 9..174 CDD:197555 57/163 (35%)
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 57/163 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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