DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and RAB30

DIOPT Version :10

Sequence 1:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_055303.2 Gene:RAB30 / 27314 HGNCID:9770 Length:203 Species:Homo sapiens


Alignment Length:179 Identity:70/179 - (39%)
Similarity:109/179 - (60%) Gaps:6/179 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72
            |.|::::|::.||||.|:.::....|.....||||.||..|.|.:|...|.:|||||||||||:|
Human     9 LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRS 73

  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDL-DNRQVST 136
            :..::||.|:..:|.||:|...||:.|..|..|....||    :....|::|||:|| :.|:||.
Human    74 ITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYAS----NKVITVLVGNKIDLAERREVSQ 134

  Fly   137 RRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVIND 185
            :||:::.::: |:.|.||||||..|||..|..:|...:....:..::|:
Human   135 QRAEEFSEAQ-DMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNN 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_524472.1 Rab7 9..179 CDD:206655 68/170 (40%)
RAB30NP_055303.2 Rab30 3..171 CDD:133314 69/166 (42%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 36..44 3/7 (43%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 8/15 (53%)

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