Protein Alignment Rab7 and Rab4a

DIOPT Version :9

• Sequence 1: NP_001247276.1
• Gene: Rab7 / 42841
• FlyBaseID: FBgn0015795
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_037151.2
• Gene: Rab4a / 25532
• RGDID: 3529
• Length: 218
• Species: Rattus norvegicus
• Alignment Length: 186
• Identity: 69/186 - (37%)
• Similarity: 112/186 - (60%)
• Gaps: 12/186 - (6%)

  Fly     1 MSGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTA 65
            ||.....|.|.:::|::..||:.|::|::.|:|.:....|||.:|.:|.:.|..:.|.:||||||
  Rat     6 MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 70

  Fly    66 GQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLD 130
            |||||:|:..::||||...:||||:|:..::..|.:|..:..:.||    .:...::.|||.|||
  Rat    71 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLAS----QNIVIILCGNKKDLD 131

  Fly   131 -NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNAL------ELEAE 179
             :|:|:...|.::.| :|::.:.||||..|.|||.||...|:..|      ||:.|
  Rat   132 ADREVTFLEASRFAQ-ENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPE 186

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab7	NP_001247276.1	Rab7	9..179	CDD:206655	65/176 (37%)
		RAB	9..174	CDD:197555	62/165 (38%)
Rab4a	NP_037151.2	Rab4	14..174	CDD:206696	62/164 (38%)
		Effector region. /evidence=ECO:0000250	42..50		3/7 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910