DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and rho5

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_593631.1 Gene:rho5 / 2542013 PomBaseID:SPAC20H4.11c Length:200 Species:Schizosaccharomyces pombe


Alignment Length:185 Identity:52/185 - (28%)
Similarity:84/185 - (45%) Gaps:32/185 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQSLG 74
            |::|:||.:.|||.|:..:....|...|..|:..:: ..:|.|:.|.:.:.:|||||||.:..|.
pombe     8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWDTAGQEDYDRLR 71

  Fly    75 VAFYRGADCCVLVYDVTAPNSFKNL-DSWRDEFLIQASPRDPDHF----PFVVLGNKVDLDN--- 131
            ...|..:...::.:.|.||.|..|: :.|..|.|         ||    |.:::|.||||.|   
pombe    72 PLSYPDSHVVLICFSVDAPESLDNVQEKWISEVL---------HFCSNLPILLVGCKVDLRNDPK 127

  Fly   132 ----------RQVSTRRAQQWCQSKNDIPYYETSAK--EGINVEMAFQVIAKNAL 174
                      :.::....|...|......|.|.|||  ||:|  ..|:..|:.::
pombe   128 TIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVN--EVFETAARASM 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 52/185 (28%)
RAB 9..174 CDD:197555 52/183 (28%)
rho5NP_593631.1 RhoA_like 6..180 CDD:206662 52/183 (28%)
RHO 9..182 CDD:197554 51/184 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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