DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and RAB38

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_071732.1 Gene:RAB38 / 23682 HGNCID:9776 Length:211 Species:Homo sapiens


Alignment Length:183 Identity:66/183 - (36%)
Similarity:110/183 - (60%) Gaps:13/183 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVN---DRVVTMQIWDTAG 66
            |:.|.|::::||..|||||::.:||::.||:.|:||||.||..|  |::   :.||.:|:||.||
Human     6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALK--VLHWDPETVVRLQLWDIAG 68

  Fly    67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVD--- 128
            ||||.::...:||.|....:|:|||.|.:|:.:..|:::...:.|..:......|:|.||.|   
Human    69 QERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLLANKCDQGK 133

  Fly   129 --LDNRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAE 179
              |.|..:   :..|:|:....:.::||||||.||::.|.:.:.|:.|..|.:
Human   134 DVLMNNGL---KMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANECD 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 64/177 (36%)
RAB 9..174 CDD:197555 62/172 (36%)
RAB38NP_071732.1 Rab32_Rab38 10..208 CDD:206692 64/179 (36%)
Effector region. /evidence=ECO:0000250 38..46 5/7 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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