DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and Rasl2-9

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_033054.1 Gene:Rasl2-9 / 19428 MGIID:104605 Length:216 Species:Mus musculus


Alignment Length:193 Identity:58/193 - (30%)
Similarity:98/193 - (50%) Gaps:17/193 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQ 67
            |..:...||:::||...|||:.|.:::...|..:|.||:|.:..|.....|...:...:||||||
Mouse     5 GEPQVQFKVVLVGDGGTGKTTFMKRHLTGEFEKEYVATLGVEVHTLVFHTNRGPIKFNVWDTAGQ 69

  Fly    68 ERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNR 132
            |:|..|...:|..|.|.::::|||:..::||:.||..:.:     |..::.|.|:.|||||:.:.
Mouse    70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPSWHKDLV-----RVCENIPIVLCGNKVDVKDM 129

  Fly   133 QVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKN----------ALELEAEAEVIND 185
            :|..:..  ....|.::.||:.||:...|.|..|..:|:.          |:...|..||:.|
Mouse   130 KVKAKPI--LFHRKKNLQYYDISARSNYNFEKPFFWLARKLIGDPNLEFVAMPALAPPEVVMD 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 53/179 (30%)
RAB 9..174 CDD:197555 52/174 (30%)
Rasl2-9NP_033054.1 Ran 11..176 CDD:206643 52/171 (30%)
RAN 16..215 CDD:128473 55/182 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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