DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab7 and Rab6a

DIOPT Version :10

Sequence 1:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_077249.1 Gene:Rab6a / 19346 MGIID:894313 Length:208 Species:Mus musculus


Alignment Length:199 Identity:76/199 - (38%)
Similarity:114/199 - (57%) Gaps:6/199 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQSLG 74
            |::.||:.|||||||:.:::...|.|.|:||||.||.:|.:.:.||.|.:|:|||||||||:||.
Mouse    15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 79

  Fly    75 VAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDL-DNRQVSTRR 138
            .::.|.:...|:|||:|..|||:....|.|:.   .:.|..|.. .:::|||.|| |.||||...
Mouse    80 PSYIRDSTVAVVVYDITNVNSFQQTTKWIDDV---RTERGSDVI-IMLVGNKTDLADKRQVSIEE 140

  Fly   139 AQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVINDFPDQITLGSQNNRPGNPD 203
            .::..:..| :.:.|||||.|.||:..|:.:|.....:|:..:...:....|.|.....:|.|..
Mouse   141 GERKAKELN-VMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVNEG 204

  Fly   204 NCQC 207
            .|.|
Mouse   205 GCSC 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_524472.1 Rab7 9..179 CDD:206655 70/169 (41%)
Rab6aNP_077249.1 Rab6 14..174 CDD:206654 69/163 (42%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20340 32..50 7/17 (41%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20340 69..88 10/18 (56%)

Return to query results.
Submit another query.