Protein Alignment Rab7 and Rab5c

DIOPT Version :9

• Sequence 1: NP_001247276.1
• Gene: Rab7 / 42841
• FlyBaseID: FBgn0015795
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: XP_036012345.1
• Gene: Rab5c / 19345
• MGIID: 105306
• Length: 280
• Species: Mus musculus
• Alignment Length: 193
• Identity: 69/193 - (35%)
• Similarity: 105/193 - (54%)
• Gaps: 32/193 - (16%)

  Fly     2 SGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAG 66
            :|.|....|:::||:|:|||:||:.::|..:|....::||||.|.|:.|.::|..|..:||||||
Mouse    61 AGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAG 125

  Fly    67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDN 131
            |||:.||...:||||...::|||:|..::|....:|..|...||||    :....:.|||.||
Mouse   126 QERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASP----NIVIALAGNKADL-- 184

  Fly   132 RQVSTRRAQQW---------------CQSK--------NDIPYYETSAKEGINVEMAFQVIAK 171
               :::||.::               |.|:        |.:.:.|||||..:||...|..|||
Mouse   185 ---ASKRAVEFQPCHLPCSPPTLFLTCLSQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab7	NP_001247276.1	Rab7	9..179	CDD:206655	67/186 (36%)
		RAB	9..174	CDD:197555	67/186 (36%)
Rab5c	XP_036012345.1	Rab5_related	67..247	CDD:206653	67/187 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910