Protein Alignment Rab7 and Rab4b

DIOPT Version :9

• Sequence 1: NP_001247276.1
• Gene: Rab7 / 42841
• FlyBaseID: FBgn0015795
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_083667.1
• Gene: Rab4b / 19342
• MGIID: 105071
• Length: 213
• Species: Mus musculus
• Alignment Length: 216
• Identity: 73/216 - (33%)
• Similarity: 116/216 - (53%)
• Gaps: 26/216 - (12%)

  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72
            |.|.:::|.:..||:.|::|::..:|......|||.:|.::.|.|..:.|.:|||||||||||:|
Mouse     8 LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRS 72

  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLD-NRQVST 136
            :..::||||...:||||:|:..::.:|.:|..:....|||    :...::.|||.||| .|:|:.
Mouse    73 VTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP----NIVVILCGNKKDLDPEREVTF 133

  Fly   137 RRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVINDFPDQITLGS------- 194
            ..|.::.| :|::.:.||||..|.|||.||...|:..|......|:     |...:||
Mouse   134 LEASRFAQ-ENELMFLETSALTGENVEEAFLKCARTILNKIDSGEL-----DPERMGSGIQYGDI 192

  Fly   195 ---QNNRPGN-----PDNCQC 207
               |..:|.:     |..|.|
Mouse   193 SLRQLRQPRSAQAVAPQPCGC 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab7	NP_001247276.1	Rab7	9..179	CDD:206655	63/170 (37%)
		RAB	9..174	CDD:197555	62/165 (38%)
Rab4b	NP_083667.1	Rab4	9..169	CDD:206696	62/164 (38%)
		Effector region. /evidence=ECO:0000250	37..45		3/7 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910