DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and Rab8a

DIOPT Version :10

Sequence 1:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_075615.2 Gene:Rab8a / 17274 MGIID:96960 Length:207 Species:Mus musculus


Alignment Length:166 Identity:67/166 - (40%)
Similarity:104/166 - (62%) Gaps:6/166 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72
            |.|::::|||.||||.::.::....|::.:.:|||.||..:.:.::.:.:.:|||||||||||::
Mouse     8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRT 72

  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDL-DNRQVST 136
            :..|:||||...:||||:|...||.|:.:|.......|| .|.:.   ::||||.|: |.||||.
Mouse    73 ITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHAS-ADVEK---MILGNKCDVNDKRQVSK 133

  Fly   137 RRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKN 172
            .|.::...... |.:.|||||..||||.||..:|::
Mouse   134 ERGEKLALDYG-IKFMETSAKANINVENAFFTLARD 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_524472.1 Rab7 9..179 CDD:206655 66/165 (40%)
Rab8aNP_075615.2 Rab8_Rab10_Rab13_like 6..172 CDD:206659 67/166 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 10/16 (63%)

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