DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and rab-11.1

DIOPT Version :10

Sequence 1:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_490675.1 Gene:rab-11.1 / 171601 WormBaseID:WBGene00004274 Length:211 Species:Caenorhabditis elegans


Alignment Length:160 Identity:61/160 - (38%)
Similarity:101/160 - (63%) Gaps:6/160 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72
            |.||:::|||.|||::|::::....|:.:.|:|||.:|.|:.:.|..:.|..||||||||||:::
 Worm    11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRA 75

  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDN-RQVST 136
            :..|:||||...:||||:....:::|::.|..|....|.    .:...:::|||.||.: |.|.|
 Worm    76 ITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHAD----QNIVIMLVGNKSDLRHLRAVPT 136

  Fly   137 RRAQQWCQSKNDIPYYETSAKEGINVEMAF 166
            ..|:.:.: :|.:.:.||||.:..|||.||
 Worm   137 DEAKIYAE-RNQLSFIETSALDSTNVEAAF 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_524472.1 Rab7 9..179 CDD:206655 60/159 (38%)
rab-11.1NP_490675.1 Rab11_like 9..173 CDD:206660 61/160 (38%)

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