Protein Alignment Rab7 and Rab3c

DIOPT Version :9

• Sequence 1: NP_001247276.1
• Gene: Rab7 / 42841
• FlyBaseID: FBgn0015795
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_598220.1
• Gene: Rab3c / 171058
• RGDID: 620923
• Length: 227
• Species: Rattus norvegicus
• Alignment Length: 224
• Identity: 77/224 - (34%)
• Similarity: 120/224 - (53%)
• Gaps: 33/224 - (14%)

  Fly     3 GRKKS-------LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
            |:|.|       :.|::|:|:|||||||.:.:|.:..|::.:.:|:|.||..|.|..|::.:.:|
  Rat    18 GQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQ 82

  Fly    61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGN 125
            |||||||||::::..|:||||...:|:||:|...||..:..|.    .|......|:...:::||
  Rat    83 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWS----TQIKTYSWDNAQVILVGN 143

  Fly   126 KVDL-DNRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQ-----VIAKNALELEAEAEVIN 184
            |.|: |.|.|||.|.:...:... ..::|||||:.|||:..|:     :..|.:..||.:
  Rat   144 KCDMEDERVVSTERGRHLGEQLG-FEFFETSAKDNINVKQTFERLVDIICDKMSESLETD----- 202

  Fly   185 DFPDQITLGSQNNR------PGNPDNCQC 207
               ..||...|:.|      |..| ||.|
  Rat   203 ---PAITGAKQSTRLKETPPPPQP-NCGC 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab7	NP_001247276.1	Rab7	9..179	CDD:206655	65/175 (37%)
		RAB	9..174	CDD:197555	63/170 (37%)
Rab3c	NP_598220.1	Rab3	30..194	CDD:206657	62/168 (37%)
		RAB	31..191	CDD:197555	62/164 (38%)
		Effector region. /evidence=ECO:0000250	59..67		2/7 (29%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	202..227		8/33 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910