Protein Alignment Rab7 and Rab3d

DIOPT Version :9

• Sequence 1: NP_001247276.1
• Gene: Rab7 / 42841
• FlyBaseID: FBgn0015795
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: XP_006242655.1
• Gene: Rab3d / 140665
• RGDID: 620924
• Length: 239
• Species: Rattus norvegicus
• Alignment Length: 208
• Identity: 63/208 - (30%)
• Similarity: 111/208 - (53%)
• Gaps: 18/208 - (8%)

  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72
            :.|::::|:|||||||.:.:|.:..|:..:.:|:|.||..|.|..:|:.:.:||||||||||:::
  Rat    42 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRT 106

  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNRQVSTR 137
            :..|:||||...:|:||:....||..:..|    ..|......|:...:::|||.||::.:|.:.
  Rat   107 ITTAYYRGAMGFLLMYDIANQESFTAVQDW----ATQIKTYSWDNAQVILVGNKCDLEDERVVSA 167

  Fly   138 RAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVINDFPDQITLGSQNNR---- 198
            ...|.........::|.||||.|||:..|:.:      ::...:.:|:..:..:....|.:
  Rat   168 EDGQRLAGDLGFEFFEASAKENINVKQVFERL------VDIICDKMNESLEPSSSPGSNGKGPAL 226

  Fly   199 ----PGNPDNCQC 207
                |..|.:|.|
  Rat   227 GDTPPPQPSSCGC 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab7	NP_001247276.1	Rab7	9..179	CDD:206655	57/169 (34%)
		RAB	9..174	CDD:197555	57/164 (35%)
Rab3d	XP_006242655.1	Rab3	42..206	CDD:206657	57/173 (33%)
		RAB	43..203	CDD:197555	57/169 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910