DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and AgaP_AGAP004204

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_313105.2 Gene:AgaP_AGAP004204 / 1274041 VectorBaseID:AGAP004204 Length:224 Species:Anopheles gambiae


Alignment Length:196 Identity:72/196 - (36%)
Similarity:114/196 - (58%) Gaps:9/196 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTA 65
            ||.....|.|.:|:|.:..||:.|::.::..:|......|||.:|.::.|.|..:.:.:||||||
Mosquito     1 MSESYDYLFKFLIIGRAGSGKSCLLHHFIENKFKEDSSHTIGVEFGSRIVNVGGKSIKLQIWDTA 65

  Fly    66 GQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDL- 129
            |||||:|:..::||||...:||||.|:.:||..|.:|.::....||    .:...:::|||.|| 
Mosquito    66 GQERFRSVTRSYYRGAAGALLVYDTTSRDSFNVLWNWLNDARTLAS----QNICILLVGNKKDLE 126

  Fly   130 DNRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVINDFPDQITLGS 194
            ::|:|:...|..:.| :|::.:.|||||.|.|||.||...:|..|   |:.|.....|::|..|.
Mosquito   127 EDREVTFLEASNFAQ-ENELIFLETSAKTGENVEEAFLKCSKTIL---AKIETGELDPERIGSGI 187

  Fly   195 Q 195
            |
Mosquito   188 Q 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 63/170 (37%)
RAB 9..174 CDD:197555 62/165 (38%)
AgaP_AGAP004204XP_313105.2 RAB 9..172 CDD:197555 63/170 (37%)
Rab4 9..169 CDD:206696 62/164 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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