DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and AgaP_AGAP004146

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_313029.4 Gene:AgaP_AGAP004146 / 1273973 VectorBaseID:AGAP004146 Length:201 Species:Anopheles gambiae


Alignment Length:205 Identity:70/205 - (34%)
Similarity:113/205 - (55%) Gaps:28/205 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTA 65
            ||.....|.|::::|||.|||:.|:.::.:..::..|.:|||.||..:.:.::.:.:.:||||||
Mosquito     1 MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 65

  Fly    66 GQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLD 130
            |||||:::..::||||...::|||.|..:||:|:..|.:|....|.    |:...:::|||.||.
Mosquito    66 GQERFRTITSSYYRGAHGIIVVYDCTDHDSFENVKQWLEEIERYAC----DNVNKLLVGNKCDLQ 126

  Fly   131 -NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELEAEAEVINDFPDQITLGS 194
             .::|.|..|.: ..::..||:.|||||...|||.||..:|         ||:            
Mosquito   127 TKKRVDTTTAME-LANQLGIPFLETSAKNATNVEQAFMTMA---------AEI------------ 169

  Fly   195 QNNRPGNPDN 204
             .||.|.|.:
Mosquito   170 -KNRVGPPSS 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 61/170 (36%)
RAB 9..174 CDD:197555 61/165 (37%)
AgaP_AGAP004146XP_313029.4 Rab1_Ypt1 7..172 CDD:206661 64/191 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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