DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and AgaP_AGAP006873

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_308884.2 Gene:AgaP_AGAP006873 / 1270205 VectorBaseID:AGAP006873 Length:219 Species:Anopheles gambiae


Alignment Length:219 Identity:79/219 - (36%)
Similarity:119/219 - (54%) Gaps:30/219 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQSLG 74
            ||::||||:||||.::::|.::|:.:.|.:|||.||..|.:.::...:.:|||||||||||::|.
Mosquito    10 KVLVLGDSNVGKTCIVHRYCDERYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTLT 74

  Fly    75 VAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLD--NRQVSTR 137
            .|:||||...:|:||||:..||.||..|.......|:|    ....|:.|||.:.:  .|.|...
Mosquito    75 TAYYRGAMGILLMYDVTSLESFNNLSYWLRNIQENAAP----DVVKVLAGNKCECNPPQRAVDKE 135

  Fly   138 RAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALE-LEAEAEVIND------FPDQI----- 190
            |.::..:: .|:|::|.|.|:.||:|.||..:|:...| .|...|..:|      ..|.|     
Mosquito   136 RGEKIAEN-FDMPFFEVSCKQNINIEDAFLTLARKIREQREHRGENFDDGDRQKGLQDMIKNGPG 199

  Fly   191 -------TLGSQNNRPGNPDNCQC 207
                   ||||    .|:...|.|
Mosquito   200 SNGLGPFTLGS----GGDGGRCSC 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 68/171 (40%)
RAB 9..174 CDD:197555 66/165 (40%)
AgaP_AGAP006873XP_308884.2 RAB 9..170 CDD:197555 66/164 (40%)
Rab 9..168 CDD:206640 65/162 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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