DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab7 and trpv5

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001186854.1 Gene:trpv5 / 100379874 XenbaseID:XB-GENE-5943291 Length:781 Species:Xenopus tropicalis


Alignment Length:26 Identity:9/26 - (34%)
Similarity:12/26 - (46%) Gaps:9/26 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DSSVGKTSLMNQ---------YVNKR 32
            :.|.|:|||:.|         |..||
 Frog    10 EESAGETSLLQQKRIRELPILYAAKR 35

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 9/26 (35%)
RAB 9..174 CDD:197555 9/26 (35%)
trpv5NP_001186854.1 trp 15..684 CDD:273311 7/21 (33%)
ANK 59..196 CDD:238125
ANK repeat 59..90 CDD:293786
ANK repeat 92..127 CDD:293786
ANK 142..288 CDD:238125
ANK repeat 143..174 CDD:293786
7TM_GPCR_Sru <470..>551 CDD:287312
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165174909
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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