DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab7 and rab32b

DIOPT Version :9

Sequence 1:NP_001247276.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_021322961.1 Gene:rab32b / 100000199 ZFINID:ZDB-GENE-090821-4 Length:213 Species:Danio rerio


Alignment Length:159 Identity:56/159 - (35%)
Similarity:86/159 - (54%) Gaps:6/159 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRV-VTMQIWDTAG 66
            |..:.|.||:::||..|||:|.:..||..:|..:.|.:||.||..|.:..:... |.:|.||.||
Zfish    11 GCTEHLFKVLVIGDHKVGKSSFVKLYVRNQFYEELKTSIGVDFSMKVIDWDAHTRVRLQFWDIAG 75

  Fly    67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDN 131
            |||.:.|...::||:....:|||:|:.:|.....:|:.|...|...::....|.|:|.||  .|.
Zfish    76 QERVRGLNRVYFRGSSGAFVVYDLTSGSSLDGALNWKRELDCQVMLKNGHPIPAVLLANK--CDE 138

  Fly   132 RQVSTRRA---QQWCQSKNDIPYYETSAK 157
            .:||.|.|   ::.||.|.....::||||
Zfish   139 TKVSRRNASLLEKLCQEKGFTGCFQTSAK 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab7NP_001247276.1 Rab7 9..179 CDD:206655 54/153 (35%)
RAB 9..174 CDD:197555 54/153 (35%)
rab32bXP_021322961.1 P-loop_NTPase 17..>167 CDD:328724 52/151 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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