DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Epp and Pfrx

DIOPT Version :10

Sequence 1:NP_001262894.1 Gene:Epp / 42840 FlyBaseID:FBgn0039137 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_477451.1 Gene:Pfrx / 32938 FlyBaseID:FBgn0027621 Length:716 Species:Drosophila melanogaster


Alignment Length:704 Identity:130/704 - (18%)
Similarity:220/704 - (31%) Gaps:237/704 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 TGALLDRPLKLEPYMSQNFMGFFVAEEDANYLKRLALQYVKEVSNSIISDTYEQLDAIVACFPWC 202
            |..||.||:   |..|..|...:  .:|.......|.......|:|..|.:.....|..|.....
  Fly   101 TPTLLPRPV---PPSSTRFTSSY--NDDLCTCSNCAYSSFSSSSSSASSTSSSSTSATAAGTALA 160

  Fly   203 GAVSSG-TRCIPRS--SRSISLEPHVKSLHLTLAYQFPQAQFNALKALVETLDASCASNWELRLY 264
            .|.:|. .:.:.||  :.||...|:..|..|       :.:..:|..|.:|.|.:..:  ||.:.
  Fly   161 SAAASAVAKKLARSVTATSIMDMPYNTSPSL-------RVRTTSLNQLKKTADLAIEN--ELHVC 216

  Fly   265 SRDPRLATKQVQKVVYPHN---------------------PHETDELELRIGDYIYLNTEVVDSS 308
               |.:.:::::|::.|.:                     ||....:.|......:::.::    
  Fly   217 ---PSVMSEELRKLLPPTSETVMTKPFPIRGERTIADCTTPHVIAMVGLPARGKTFISKKL---- 274

  Fly   309 SDGWAEGISWLTGSTGHLPVNYTERTAESDAWTLHRVVQLSKSVASS-----------------L 356
                |..::|:..||....:....|.| :.|:..|...:.....|.:                 |
  Fly   275 ----ARYLNWIGISTRVFNLGEYRRHA-TTAYKSHEFFRADNEEAMAIRNRCANQALHDSCDWLL 334

  Fly   357 TSAEDLDIVDGRSISTEPDDRQNTAHPDIIEGSSFE--------ESEQSVEKYLRQTLKPCLELP 413
            :....:.:.|..: ||.  ||:...|..:::...|.        :..|.:|:.:.:     :::.
  Fly   335 SGQGSIAVFDATN-STR--DRRQLIHDIVVKQHGFRLFFVESICDDPQIIEQNILE-----VKVS 391

  Fly   414 SVQLLNSHNLTHQHNPNTPTIEITTNMSSSSTSMSKQPVDEILVEPPAAQPPRPDDTLSVHSDHS 478
            |...||.         ||..:...............||:||:           .:..||....::
  Fly   392 SPDYLNM---------NTELVVRDFLQRIEHYEERYQPIDEV-----------TESHLSFMKVYN 436

  Fly   479 L--------HPGSLDAS--------HAKNRKIYIMRHGERVDFTFGTWIPYCFDEFGNYMRKDLN 527
            .        :.|.:::.        |...|.||:.||||                      .:.|
  Fly   437 AGKKVVVYNNEGHVESRIVYYLMNIHITPRTIYLTRHGE----------------------SEYN 479

  Fly   528 MPKTLPRRKNSPEGWQNDSPLTNVGVYQANLIGQALLEAQVQIDHVYCSPSYRCIQTCTSALEGL 592
            :...:          ..||.|:..|...||.:...:  ||.|||                     
  Fly   480 LSGLI----------GGDSNLSARGHQYANALSTFI--AQQQID--------------------- 511

  Fly   593 KLTGKQKIKLEPGLFEWMAWYPSGVPD----------WLTKNELTEAKFDVDLDYEPVQP--ASE 645
                        ||..|.:|....:..          |...||: :|....::.||.::.  ..|
  Fly   512 ------------GLRVWTSWMKRAIQTVADVKAPQERWKALNEI-DAGHCEEMTYEQIKEKFPEE 563

  Fly   646 LTAR----------LKESTEQFYERNHDVILQLLEQTTGNILVVAH--------ATTLDTCSRQL 692
            ..||          ..||.|....|...||::|..|  ||:|||:|        |..||..:.:|
  Fly   564 FKARDVNKFAYRYPRGESYEDLVARLEPVIMELERQ--GNVLVVSHQAVLRCLFAYFLDKSADEL 626

  Fly   693 TGGVPRSTNELRQVIHKIPYCSLATVEQVDGVWKLVEPECLPV----THSKNPR 742
                |.....|..||...|......||.:.          ||:    ||...|:
  Fly   627 ----PYLYVPLHTVIKLTPVAYGCKVEHIK----------LPIDAVDTHRPKPK 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EppNP_001262894.1 UBA_UBS3B 23..60 CDD:270486
SH3_UBASH3 275..333 CDD:212725 9/78 (12%)
PhoE 492..728 CDD:440175 57/265 (22%)
PfrxNP_477451.1 6PF2K 254..465 CDD:396253 35/247 (14%)
His_Phos_1 468..651 CDD:459751 56/256 (22%)
Blue background indicates that the domain is not in the aligned region.

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