DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13604 and Ubash3b

DIOPT Version :9

Sequence 1:NP_001262894.1 Gene:CG13604 / 42840 FlyBaseID:FBgn0039137 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_001178721.1 Gene:Ubash3b / 315579 RGDID:1310357 Length:638 Species:Rattus norvegicus


Alignment Length:749 Identity:260/749 - (34%)
Similarity:366/749 - (48%) Gaps:139/749 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PRKS--QTPTRICISKQHLTPLQTLLQMGFPRHRAEKALASTGNRGVQIASDWLLAHVNDGTLDE 68
            ||:.  |.|..:    :|.:.|..||.|||||.||:|||||||.|.||.|.|||.:||.|..||:
  Rat    13 PRRDRLQRPGTV----RHGSALDLLLSMGFPRARAQKALASTGGRSVQAACDWLFSHVGDPFLDD 73

  Fly    69 CAPREYIIYACPTGPFLQQLEEFWAKSRQMCGWNGAHNYVPHITLVSFFKAPDECSLQLSKALKQ 133
            ..||||::|..||||..|:|.:||.:|:|:||.|.|||..|||||..||...|.....|.:||:.
  Rat    74 PLPREYVLYLRPTGPLAQKLSDFWQQSKQICGKNKAHNIFPHITLCQFFMCEDSKVDALGEALQT 138

  Fly   134 VVDMTGALLDRPLKLEPYMSQNFMGFFVAEEDANYLKRLALQYVKEVSNSIISDTYEQLDAIVAC 198
            .|.........||.||.|.|.||:|.||.|:.|..||:.|..:..|.:                 
  Rat   139 TVSRWRCKFSAPLPLELYTSSNFIGLFVKEDSAEVLKKFAADFAAEAA----------------- 186

  Fly   199 FPWCGAVSSGTRCIPRSSRSISLEPHVKSLHLTLAYQFPQAQFNALKALVETLDASCASNWELRL 263
                            |...:.:|||.|.||:||||.|..:....|:.|.:.:|.....:|...:
  Rat   187 ----------------SKTEVHVEPHKKQLHVTLAYHFQASHLPTLEKLAQNIDVKLGCDWVATI 235

  Fly   264 YSRDPRLATKQVQKVVYPHNPHETDELELRIGDYIYLNTEVVDSSSDGWAEGISWLTGSTGHLPV 328
            :|||.|.|..:..:|:||::|...|||||..||:|:::.....|:|:||..|.|..||.:|.||.
  Rat   236 FSRDIRFANHETLQVIYPYSPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPE 300

  Fly   329 NYTERTAESDAWTLHRVVQLSKSVASSLTSAEDLDIVDGRSISTEPDDRQNTAHPDIIEGSSFEE 393
            ||..:..|...|..|....:..:|:||.                            :..|....|
  Rat   301 NYITKADECSTWIFHGSCSILNTVSSSA----------------------------LAFGDGALE 337

  Fly   394 SEQSVEKYLRQTLKPCLELPSVQLLNSHNLTHQHNPNTPTIEITTNMSSSSTSMSKQPVDEILVE 458
            ..|..::.|.:|                         ||...|                      
  Rat   338 RRQYEDQGLGET-------------------------TPLTII---------------------- 355

  Fly   459 PPAAQPPRPDDTLSVHSDHSLHPGSLDASHAKNRKIYIMRHGERVDFTFGT-WIPYCFDEFGNYM 522
               .||.:|   |.|:|    .||      .:.|.:::.|||||:|..||. |:..|||..|.|:
  Rat   356 ---CQPMQP---LRVNS----QPG------PQKRCLFVCRHGERMDVVFGKYWLSQCFDAKGRYI 404

  Fly   523 RKDLNMPKTLPRRKNSPEGWQNDSPLTNVGVYQANLIGQALLEAQVQIDHVYCSPSYRCIQTCTS 587
            |.:||||.:||:|..|...::.|:|:|..|..||.|:|:||||:...|||||||||.||:||..:
  Rat   405 RTNLNMPHSLPQRSGSFRDYEKDAPITVFGCMQARLVGEALLESNTVIDHVYCSPSLRCVQTAHN 469

  Fly   588 ALEGLKLTGKQKIKLEPGLFEWMAWYP-SGVPDWLTKNELTEAKFDVDLDYEPVQPASELTARLK 651
            .|:||:.....||::|||||||..|.. |.:|.|:..:||..|...||..|.|..|.|:|.  :.
  Rat   470 ILKGLQQDNHLKIRVEPGLFEWTKWVAGSTLPAWMPPSELAAANLSVDTTYRPHIPVSKLV--IS 532

  Fly   652 ESTEQFYERNHDVILQLLEQTT---GNILVVAHATTLDTCSRQLTGGVPRSTNELRQVIHKIPYC 713
            ||.:.:..|:..|..:::.:..   .|||:||||::|:.|:.||.|..|:::.:..|::.||||.
  Rat   533 ESYDTYINRSFQVTKEIISECKSKGNNILIVAHASSLEACTCQLQGLSPQNSKDFVQMVRKIPYL 597

  Fly   714 SLATVEQV--DGVWKLVEPECLPVTHSKNPRFEW 745
            ...:.|::  .|:|:|.:|..||:||.....|.|
  Rat   598 GFCSCEELGETGIWQLTDPPILPLTHGPTGGFNW 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13604NP_001262894.1 UBA_UBS3B 23..60 CDD:270486 24/36 (67%)
SH3_UBASH3 275..333 CDD:212725 25/57 (44%)
His_Phos_1 494..728 CDD:278716 99/240 (41%)
Ubash3bNP_001178721.1 UBA_UBS3B 28..65 CDD:270486 24/36 (67%)
SH3_UBASH3B 245..306 CDD:212869 25/60 (42%)
HP_PGM_like 375..587 CDD:132718 91/213 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343848
Domainoid 1 1.000 140 1.000 Domainoid score I4636
eggNOG 1 0.900 - - E1_COG0406
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13152
Inparanoid 1 1.050 468 1.000 Inparanoid score I1464
OMA 1 1.010 - - QHG45538
OrthoDB 1 1.010 - - D130139at33208
OrthoFinder 1 1.000 - - FOG0002396
OrthoInspector 1 1.000 - - otm45277
orthoMCL 1 0.900 - - OOG6_102745
Panther 1 1.100 - - LDO PTHR16469
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1080
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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