DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13604 and Ubash3a

DIOPT Version :9

Sequence 1:NP_001262894.1 Gene:CG13604 / 42840 FlyBaseID:FBgn0039137 Length:763 Species:Drosophila melanogaster
Sequence 2:XP_017457143.1 Gene:Ubash3a / 309666 RGDID:1310305 Length:624 Species:Rattus norvegicus


Alignment Length:732 Identity:246/732 - (33%)
Similarity:349/732 - (47%) Gaps:150/732 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LQTLLQMGFPRHRAEKALASTGNRGVQIASDWLLAHVNDGTLDECAPREYIIYACPTGPFLQQLE 89
            |..||.:|||.|.|.||||:||.:..:.|:|||..|.:|.:||:..|:||.::.|||||.|::|:
  Rat    25 LDPLLALGFPTHTALKALAATGMKTAEEAADWLHGHCSDPSLDDPIPQEYALFLCPTGPLLEKLQ 89

  Fly    90 EFWAKSRQMCGWNGAHNYVPHITLVSFFKAPD---ECSLQ-LSKALKQVVDMTGALLDRPLKLEP 150
            |||.:||:.|..|.||...||:||..||...|   ||..: |.:|..:::....||:  ||.|  
  Rat    90 EFWRESRRQCAKNKAHEVFPHVTLCDFFTCEDQKVECLYEALRRAGDRILGSFPALV--PLVL-- 150

  Fly   151 YMSQNFMGFFVAEEDANYLKRLALQYVKEVSNSIISDTYEQLDAIVACFPWCGAVSSGTRCIPRS 215
            :.|.:::|||:.:..|:.::..|:.:..|.|            |:..|                 
  Rat   151 HSSISYLGFFINDSPADVIRDFAMAFATEAS------------ALADC----------------- 186

  Fly   216 SRSISLEPHVKSLHLTLAYQFPQAQFNALKALVETLDASCASNWELRLYSRDPRLATKQVQKVVY 280
                :::|..|.||||||::|.......|:.|...:..|....|...|||||.|....|..|.::
  Rat   187 ----TIKPCTKQLHLTLAHKFYPHHQRTLEQLARAIQPSHTCQWTAALYSRDMRFVHYQTLKALF 247

  Fly   281 PHNPHETDELELRIGDYIYLNTEVVDSSSDGWAEGISWLTGSTGHLPVNYTERTAESDAWTLHRV 345
            .:.|...|||.|..||||:::....:.:|:|||.|||..||..|.||.|||||..|:|.|..||.
  Rat   248 QYKPQNADELMLSPGDYIFVDPTQQEEASEGWAIGISHRTGCRGFLPENYTERANEADTWVKHRT 312

  Fly   346 VQLSKSVASSLTSAEDLDIVDGRSISTEPDDRQNTAHPDIIEGSSFEESEQSVEKYLRQTLKPCL 410
            ...  |:|..|.|.::.          |...|:|        |.|                    
  Rat   313 YTF--SLAMDLNSRKEF----------EASSRRN--------GDS-------------------- 337

  Fly   411 ELPSVQLLNSHNLTHQHNPNTPTIEITTNMSSSSTSMSKQPVDEILVEPPAAQPPRPDDTLSVHS 475
                            |.|              |.|.|...:.                      
  Rat   338 ----------------HTP--------------SVSRSISDIQ---------------------- 350

  Fly   476 DHSLHPGSLDASHAKNRKIYIMRHGERVDFTFG-TWIPYCFDEFGNYMRKDLNMPKTLPRRKNSP 539
                   :|.|:.|: |.:.::|||||||..|| :|:..|....|.|.|.|||.|::||||.|..
  Rat   351 -------ALQATIAR-RGVLVIRHGERVDQVFGKSWLHQCTTTDGKYYRPDLNFPRSLPRRSNGI 407

  Fly   540 EGWQNDSPLTNVGVYQANLIGQALLEAQVQIDHVYCSPSYRCIQTCTSALEGLKLTGKQKIKLEP 604
            :.::||.||::.|::||.|.|:|||::.|::..|:.||:.||:||....||.|||..:.|||:||
  Rat   408 KDFENDPPLSSCGIFQARLAGEALLDSGVRVTAVFASPALRCVQTAKHILEELKLERRLKIKVEP 472

  Fly   605 GLFEWMAWYP-SGVPDWLTKNELTEAKFDVDLDYEPVQPASELTARLKESTEQFYER---NHDVI 665
            |:||||.|.. .....:||..||.||.|:|||||.|..|...|..  .||.:|:.||   :...|
  Rat   473 GIFEWMKWEAGKATLTFLTLEELKEADFNVDLDYRPAFPCCSLLP--AESYDQYVERCAVSMGQI 535

  Fly   666 LQLLEQTTGNILVVAHATTLDTCSRQLTGGVPRSTNELRQVIHKIPYCSLATVEQ--VDGVWKLV 728
            :....|..|..|:|:|::.||:|:|.|.|..||...:..|::.|||...:...|:  .||.|.||
  Rat   536 INTCPQDMGITLIVSHSSALDSCTRPLLGLPPRECGDFAQLVRKIPSLGMCFCEENKEDGKWDLV 600

  Fly   729 EPECLPVTHSKNPRFEW 745
            .|....:||..|..|.|
  Rat   601 NPPVKTLTHGANSVFNW 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13604NP_001262894.1 UBA_UBS3B 23..60 CDD:270486 18/34 (53%)
SH3_UBASH3 275..333 CDD:212725 25/57 (44%)
His_Phos_1 494..728 CDD:278716 101/240 (42%)
Ubash3aXP_017457143.1 UBA_UBS3A_like 25..61 CDD:270485 18/35 (51%)
SH3_UBASH3A 241..300 CDD:212870 26/58 (45%)
His_Phos_1 413..575 CDD:395236 69/163 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343847
Domainoid 1 1.000 140 1.000 Domainoid score I4636
eggNOG 1 0.900 - - E1_COG0406
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 468 1.000 Inparanoid score I1464
OMA 1 1.010 - - QHG45538
OrthoDB 1 1.010 - - D130139at33208
OrthoFinder 1 1.000 - - FOG0002396
OrthoInspector 1 1.000 - - otm45277
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16469
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1080
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.870

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